The Quran is against the hypocrites
Satbir Singh Bedi | 30 Mar 2015

The Quran is against the hypocrites. It, therefore, issues a grave warning to the hostile pagan tribes who were repeatedly breaking treaty terms that unless they gave up hostilities and entered the fold of Islam, they could be put to death. The following verse is relevant:

9:5. Then when the Sacred Months (the Ist, 7th, 11th, and 12th months of the Islamic calendar) have passed, then kill the Mushrikun (see V.2:105) wherever you find them, and capture them and besiege them, and prepare for them each and every ambush. But if they repent and perform As-Salat (Iqamat-as-Salat), and give Zakat, then leave their way free. Verily, Allah is Oft-Forgiving, Most Merciful. 
It declares them as spiritually impure and forbids their entry into the Inviolable House of worship (Kaba) reserving it for only pure worship (of God without any association with idols).The following verse is relevant:
9:28. O you who believe (in Allah's Oneness and in His Messenger (Muhammad )! Verily, the Mushrikun (polytheists, pagans, idolaters, disbelievers in the Oneness of Allah, and in the Message of Muhammad ) are Najasun (impure) . So let them not come near Al-Masjid-al-Haram (at Makkah) after this year, and if you fear poverty, Allah will enrich you if He will, out of His Bounty. Surely, Allah is All-Knowing, All-Wise.
It commands the Muslims to fight those of the pagans who were around them (in a manner) that they find how firm they (the Muslims) could be.  The following verse refers: 
9:123. O you who believe! Fight those of the disbelievers who are close to you, and let them find harshness in you, and know that Allah is with those who are the Al-Muttaqun (the pious - see V.2:2). 
It also commands the Prophet to be firm  against the pagans  and the hypocrites  as in the following verse:
9:73. O Prophet (Muhammad )! Strive hard against the disbelievers and the hypocrites, and be harsh against them, their abode is Hell, - and worst indeed is that destination. 
It warns the believers that there were hypocrites all around them and among the people in Medina, who had grown bold in hypocrisy as in the following verse:
9:101. And among the bedouins round about you, some are hypocrites, and so are some among the people of Al-Madinah, they exaggerate and persist in hypocrisy, you (O Muhammad ) know them not, We know them. We shall punish them twice, and thereafter they shall be brought back to a great (horrible) torment.
It curses them as in the following verse:
9:68. Allah has promised the hypocrites; men and women, and the disbelievers, the Fire of Hell, therein shall they abide. It will suffice them. Allah has cursed them and for them is the lasting torment.
It calls them liars.  The following verses refer:
9:42. Had it been a near gain (booty in front of them) and an easy journey, they would have followed you, but the distance (Tabuk expedition) was long for them, and they would swear by Allah, "If we only could, we would certainly have come forth with you." They destroy their ownselves, and Allah knows that they are liars.
9:107. And as for those who put up a mosque by way of harming and disbelief, and to disunite the believers, and as an outpost for those who warred against Allah and His Messenger (Muhammad ) aforetime, they will indeed swear that their intention is nothing but good. Allah bears witness that they are certainly liars.
It also calls them deviants. The  following verses are relevant:
9:96. They (the hypocrites) swear to you (Muslims) that you may be pleased with them, but if you are pleased with them, certainly Allah is not pleased with the people who are Al-Fasiqun (rebellious, disobedient to Allah).
9:67. The hypocrites, men and women, are from one another, they enjoin (on the people) Al-Munkar (i.e. disbelief and polytheism of all kinds and all that Islam has forbidden), and forbid (people) from Al-Ma'ruf (i.e. Islamic Monotheism and all that Islam orders one to do), and they close their hands [from giving (spending in Allah's Cause) alms, etc.]. They have forgotten Allah, so He has forgotten them. Verily, the hypocrites are the Fasiqun (rebellious, disobedient to Allah).
It charges some of the believing nomadic Arabs to being intense in kufr and hypocrisy. The following verse refers:
9:97. The bedouins are the worst in disbelief and hypocrisy, and more likely to be in ignorance of the limits (Allah's Commandments and His Legal Laws, etc.) which Allah has revealed to His Messenger. And Allah is All-Knower, All-Wise.
It forbids the Prophet to pray over any of the above noted nomads who had died, nor to stand by his grave.  The following verse refers:
9:84. And never (O Muhammad ) pray (funeral prayer) for any of them (hypocrites) who dies, nor stand at his grave. Certainly they disbelieved in Allah and His Messenger, and died while they were Fasiqun (rebellious, - disobedient to Allah and His Messenger ).
As the Prophet may still have prayed for all his followers, including the hypocrites, the revelation warns him that even if he sought forgiveness for them seventy times, God will never forgive them.  The following verse is relevant:
9:80.Whether you (O Muhammad ) ask forgiveness for them (hypocrites) or ask not forgiveness for them ... (and even) if you ask seventy times for their forgiveness ... Allah will not forgive them, because they have disbelieved in Allah and His Messenger (Muhammad ). And Allah guides not those people who are Fasiqun (rebellious, disobedient to Allah).